Carnation DB

Dca42067.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold470)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42067.1	668	744	899	4.22	77	50	2e-14
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	1445	1521	1553	4.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42067.1	5	627	899	24.91	623	35	3e-93
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	843	1475	1539	41.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold470	Augustus	mRNA	130973	138199	.	+	.	ID=Dca42067.1;Parent=Dca42067
scaffold470	Augustus	exon	130973	131700	.	+	.	ID=Dca42067.1.exon1;Parent=Dca42067.1
scaffold470	Augustus	exon	131838	133000	.	+	.	ID=Dca42067.1.exon2;Parent=Dca42067.1
scaffold470	Augustus	exon	133614	133731	.	+	.	ID=Dca42067.1.exon3;Parent=Dca42067.1
scaffold470	Augustus	exon	133962	134191	.	+	.	ID=Dca42067.1.exon4;Parent=Dca42067.1
scaffold470	Augustus	exon	137739	138199	.	+	.	ID=Dca42067.1.exon5;Parent=Dca42067.1