Carnation DB

Dca42306.1

Annotation

7-exons
f-1
sp|A2CHK0_BETVM#FLC-like 1 splice variant 4#Beta vulgaris subsp maritima (Sea beet) (Beta maritima)#Name=FL1#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
Repeat List (scaffold4748)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42306.1	51	191	248	25.4	141	45	3e-21
Target_name	Start	End	Length	Cov(%)
sp\|A2CHK0_BETVM	69	194	214	58.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42306.1	51	165	248	15.32	115	33	4e-10
Target_name	Start	End	Length	Cov(%)
AT5G60910.1	66	173	242	44.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4748	Augustus	mRNA	3305	7768	.	-	.	ID=Dca42306.1;Parent=Dca42306
scaffold4748	Augustus	exon	3305	3562	.	-	.	ID=Dca42306.1.exon1;Parent=Dca42306.1
scaffold4748	Augustus	exon	3635	3676	.	-	.	ID=Dca42306.1.exon2;Parent=Dca42306.1
scaffold4748	Augustus	exon	5147	5188	.	-	.	ID=Dca42306.1.exon3;Parent=Dca42306.1
scaffold4748	Augustus	exon	5754	5853	.	-	.	ID=Dca42306.1.exon4;Parent=Dca42306.1
scaffold4748	Augustus	exon	5939	6000	.	-	.	ID=Dca42306.1.exon5;Parent=Dca42306.1
scaffold4748	Augustus	exon	6308	6400	.	-	.	ID=Dca42306.1.exon6;Parent=Dca42306.1
scaffold4748	Augustus	exon	7619	7768	.	-	.	ID=Dca42306.1.exon7;Parent=Dca42306.1