Carnation DB

Dca42418.1

Annotation

6-exons
f-1
sp|A5AT48_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021649#GO:0016021;GO:0008236;GO:0006508#1F1P1C
sp|B9R7J2_RICCO#Signal peptidase I, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1592330#GO:0016021;GO:0008236;GO:0006508#1F1P1C
Repeat List (scaffold477)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42418.1	1	389	415	45.3	389	49	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|A5AT48_VITVI	1	328	368	89.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42418.1	1	389	415	38.55	389	41	1e-73
Target_name	Start	End	Length	Cov(%)
AT1G06870.1	1	326	367	88.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold477	Augustus	mRNA	25189	29046	.	+	.	ID=Dca42418.1;Parent=Dca42418
scaffold477	Augustus	exon	25189	26064	.	+	.	ID=Dca42418.1.exon1;Parent=Dca42418.1
scaffold477	Augustus	exon	27652	27720	.	+	.	ID=Dca42418.1.exon2;Parent=Dca42418.1
scaffold477	Augustus	exon	27903	27971	.	+	.	ID=Dca42418.1.exon3;Parent=Dca42418.1
scaffold477	Augustus	exon	28059	28145	.	+	.	ID=Dca42418.1.exon4;Parent=Dca42418.1
scaffold477	Augustus	exon	28253	28320	.	+	.	ID=Dca42418.1.exon5;Parent=Dca42418.1
scaffold477	Augustus	exon	28968	29046	.	+	.	ID=Dca42418.1.exon6;Parent=Dca42418.1