Carnation DB

Dca42600.1

Annotation

5-exons
f-1
sp|B8AGX7_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_05650#GO:0003676;GO:0000166;GO:0000179#3F0P0C
Os02t0122800-02 Nucleotide-binding, alpha-beta plait domain containing protein.
Repeat List (scaffold48)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42600.1	1	279	350	51.14	279	63	2e-84
Target_name	Start	End	Length	Cov(%)
sp\|B8AGX7_ORYSI	325	590	603	44.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42600.1	1	237	350	46.57	237	68	1e-84
Target_name	Start	End	Length	Cov(%)
Os02t0122800-02	1	235	280	83.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold48	Augustus	mRNA	76752	79554	.	-	.	ID=Dca42600.1;Parent=Dca42600
scaffold48	Augustus	exon	76752	76794	.	-	.	ID=Dca42600.1.exon1;Parent=Dca42600.1
scaffold48	Augustus	exon	76936	77490	.	-	.	ID=Dca42600.1.exon2;Parent=Dca42600.1
scaffold48	Augustus	exon	77715	77950	.	-	.	ID=Dca42600.1.exon3;Parent=Dca42600.1
scaffold48	Augustus	exon	78272	78384	.	-	.	ID=Dca42600.1.exon4;Parent=Dca42600.1
scaffold48	Augustus	exon	79449	79554	.	-	.	ID=Dca42600.1.exon5;Parent=Dca42600.1