Carnation DB

Dca4293.1

Annotation

6-exons
f-1
sp|A5B0S6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_023217#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold11597)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4293.1	1	159	176	67.61	159	75	3e-65
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	1438	1597	1717	9.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4293.1	1	131	176	22.15	131	30	5e-09
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	1155	1286	1539	8.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11597	Augustus	mRNA	157	3037	.	-	.	ID=Dca4293.1;Parent=Dca4293
scaffold11597	Augustus	exon	157	674	.	-	.	ID=Dca4293.1.exon1;Parent=Dca4293.1
scaffold11597	Augustus	exon	771	985	.	-	.	ID=Dca4293.1.exon2;Parent=Dca4293.1
scaffold11597	Augustus	exon	1136	1317	.	-	.	ID=Dca4293.1.exon3;Parent=Dca4293.1
scaffold11597	Augustus	exon	1396	1614	.	-	.	ID=Dca4293.1.exon4;Parent=Dca4293.1
scaffold11597	Augustus	exon	1730	2152	.	-	.	ID=Dca4293.1.exon5;Parent=Dca4293.1
scaffold11597	Augustus	exon	2549	3037	.	-	.	ID=Dca4293.1.exon6;Parent=Dca4293.1