Carnation DB

Dca43059.1

Annotation

5-exons
f-1
sp|B9MVI5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826764#unknown#0F0P0C
Os03t0766000-01 Similar to seven transmembrane domain protein.
Repeat List (scaffold488)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43059.1	43	178	178	62.92	136	83	5e-59
Target_name	Start	End	Length	Cov(%)
sp\|B9MVI5_POPTR	27	161	228	59.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43059.1	22	178	178	62.92	157	70	2e-58
Target_name	Start	End	Length	Cov(%)
Os03t0766000-01	4	161	228	69.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold488	Augustus	mRNA	79006	84648	.	-	.	ID=Dca43059.1;Parent=Dca43059
scaffold488	Augustus	exon	79006	79056	.	-	.	ID=Dca43059.1.exon1;Parent=Dca43059.1
scaffold488	Augustus	exon	80415	80530	.	-	.	ID=Dca43059.1.exon2;Parent=Dca43059.1
scaffold488	Augustus	exon	82646	82760	.	-	.	ID=Dca43059.1.exon3;Parent=Dca43059.1
scaffold488	Augustus	exon	84305	84364	.	-	.	ID=Dca43059.1.exon4;Parent=Dca43059.1
scaffold488	Augustus	exon	84454	84648	.	-	.	ID=Dca43059.1.exon5;Parent=Dca43059.1