Carnation DB

Dca43849.1

Annotation

7-exons
f-1
sp|B9RCT4_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1692100#unknown#0F0P0C
AT4G23895.1 | Symbols: | Pleckstrin homology (PH) domain-containing protein | chr4:12422883-12424146 FORWARD LENGTH=247
Repeat List (scaffold50)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43849.1	1	255	269	52.78	255	56	1e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9RCT4_RICCO	1	236	245	96.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43849.1	1	258	269	51.3	258	54	1e-73
Target_name	Start	End	Length	Cov(%)
AT4G23895.1	1	241	247	97.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold50	Augus-PASA	mRNA	226355	227871	.	-	.	ID=Dca43849.1;Parent=Dca43849
scaffold50	Augus-PASA	exon	226355	226459	.	-	.	ID=Dca43849.1.exon1;Parent=Dca43849.1
scaffold50	Augus-PASA	exon	226686	226840	.	-	.	ID=Dca43849.1.exon2;Parent=Dca43849.1
scaffold50	Augus-PASA	exon	226957	227074	.	-	.	ID=Dca43849.1.exon3;Parent=Dca43849.1
scaffold50	Augus-PASA	exon	227173	227236	.	-	.	ID=Dca43849.1.exon4;Parent=Dca43849.1
scaffold50	Augus-PASA	exon	227336	227418	.	-	.	ID=Dca43849.1.exon5;Parent=Dca43849.1
scaffold50	Augus-PASA	exon	227503	227587	.	-	.	ID=Dca43849.1.exon6;Parent=Dca43849.1
scaffold50	Augustus	exon	227672	227871	.	-	.	ID=Dca43849.1.exon7;Parent=Dca43849.1