Carnation DB

Dca43904.1

Annotation

5-exons
f-1
sp|B9T034_RICCO#Mitochondria associated granulocyte macrophage csf signaling molecule, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1144400#unknown#0F0P0C
Repeat List (scaffold5002)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43904.1	166	205	205	13.65	40	70	4e-08
Target_name	Start	End	Length	Cov(%)
sp\|B9T034_RICCO	45	84	190	21.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43904.1	167	200	205	11.7	34	71	6e-07
Target_name	Start	End	Length	Cov(%)
AT3G59280.1	31	64	116	29.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5002	Augustus	mRNA	14144	21115	.	+	.	ID=Dca43904.1;Parent=Dca43904
scaffold5002	Augustus	exon	14144	14184	.	+	.	ID=Dca43904.1.exon1;Parent=Dca43904.1
scaffold5002	Augustus	exon	16292	16455	.	+	.	ID=Dca43904.1.exon2;Parent=Dca43904.1
scaffold5002	Augustus	exon	17044	17150	.	+	.	ID=Dca43904.1.exon3;Parent=Dca43904.1
scaffold5002	Augustus	exon	17251	17437	.	+	.	ID=Dca43904.1.exon4;Parent=Dca43904.1
scaffold5002	Augustus	exon	20997	21115	.	+	.	ID=Dca43904.1.exon5;Parent=Dca43904.1