Carnation DB

Dca44017.1

Annotation

6-exons
f-1
sp|F6H6V7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g01760#GO:0004650;GO:0005975#1F1P0C
AT3G16850.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:5748692-5750981 FORWARD LENGTH=455
Repeat List (scaffold5026)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44017.1	13	427	449	63.25	415	69	1e-169
Target_name	Start	End	Length	Cov(%)
sp\|F6H6V7_VITVI	13	428	455	91.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44017.1	1	448	449	58.57	448	59	8e-148
Target_name	Start	End	Length	Cov(%)
AT3G16850.1	3	451	455	98.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5026	Augustus	mRNA	15782	19404	.	-	.	ID=Dca44017.1;Parent=Dca44017
scaffold5026	Augustus	exon	15782	16440	.	-	.	ID=Dca44017.1.exon1;Parent=Dca44017.1
scaffold5026	Augustus	exon	17410	17480	.	-	.	ID=Dca44017.1.exon2;Parent=Dca44017.1
scaffold5026	Augustus	exon	17586	17760	.	-	.	ID=Dca44017.1.exon3;Parent=Dca44017.1
scaffold5026	Augustus	exon	17867	17987	.	-	.	ID=Dca44017.1.exon4;Parent=Dca44017.1
scaffold5026	Augustus	exon	18559	18876	.	-	.	ID=Dca44017.1.exon5;Parent=Dca44017.1
scaffold5026	Augustus	exon	19399	19404	.	-	.	ID=Dca44017.1.exon6;Parent=Dca44017.1