Dca44080.1
Annotation
- 2-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold504)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44080.1 |
29 |
301 |
301 |
67.44 |
273 |
75 |
5e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
871 |
1143 |
1788 |
15.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44080.1 |
50 |
301 |
301 |
30.23 |
252 |
37 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
60 |
311 |
591 |
42.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold504 |
Augustus |
mRNA |
43794 |
47365 |
. |
- |
. |
ID=Dca44080.1;Parent=Dca44080 |
| scaffold504 |
Augustus |
exon |
43794 |
44615 |
. |
- |
. |
ID=Dca44080.1.exon1;Parent=Dca44080.1 |
| scaffold504 |
Augustus |
exon |
47282 |
47365 |
. |
- |
. |
ID=Dca44080.1.exon2;Parent=Dca44080.1 |
