Carnation DB

Dca44367.1

Annotation

32-exons
f-1
sp|G7KC35_MEDTR#Lysine-specific demethylase 5D#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g010300#GO:0005634;GO:0003677;GO:0008168;GO:0016706;GO:0008270#4F0P1C
Repeat List (scaffold51)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44367.1	1	1748	1845	50.18	1748	51	0
Target_name	Start	End	Length	Cov(%)
sp\|G7KC35_MEDTR	1	1779	1832	97.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44367.1	6	979	1845	27.69	974	49	0
Target_name	Start	End	Length	Cov(%)
Os06t0731600-00	24	1066	1070	97.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold51	Augustus	mRNA	343645	358113	.	+	.	ID=Dca44367.1;Parent=Dca44367
scaffold51	Augustus	exon	343645	344984	.	+	.	ID=Dca44367.1.exon1;Parent=Dca44367.1
scaffold51	Augustus	exon	345887	345944	.	+	.	ID=Dca44367.1.exon2;Parent=Dca44367.1
scaffold51	Augustus	exon	346033	346155	.	+	.	ID=Dca44367.1.exon3;Parent=Dca44367.1
scaffold51	Augustus	exon	346674	346731	.	+	.	ID=Dca44367.1.exon4;Parent=Dca44367.1
scaffold51	Augustus	exon	346824	346960	.	+	.	ID=Dca44367.1.exon5;Parent=Dca44367.1
scaffold51	Augustus	exon	347417	347575	.	+	.	ID=Dca44367.1.exon6;Parent=Dca44367.1
scaffold51	Augustus	exon	347679	347765	.	+	.	ID=Dca44367.1.exon7;Parent=Dca44367.1
scaffold51	Augustus	exon	347955	348152	.	+	.	ID=Dca44367.1.exon8;Parent=Dca44367.1
scaffold51	Augustus	exon	348332	348484	.	+	.	ID=Dca44367.1.exon9;Parent=Dca44367.1
scaffold51	Augustus	exon	348615	348806	.	+	.	ID=Dca44367.1.exon10;Parent=Dca44367.1
scaffold51	Augustus	exon	349698	349784	.	+	.	ID=Dca44367.1.exon11;Parent=Dca44367.1
scaffold51	Augustus	exon	349874	349990	.	+	.	ID=Dca44367.1.exon12;Parent=Dca44367.1
scaffold51	Augustus	exon	350087	350294	.	+	.	ID=Dca44367.1.exon13;Parent=Dca44367.1
scaffold51	Augustus	exon	350426	350490	.	+	.	ID=Dca44367.1.exon14;Parent=Dca44367.1
scaffold51	Augustus	exon	350869	350927	.	+	.	ID=Dca44367.1.exon15;Parent=Dca44367.1
scaffold51	Augustus	exon	351095	351226	.	+	.	ID=Dca44367.1.exon16;Parent=Dca44367.1
scaffold51	Augustus	exon	351310	351469	.	+	.	ID=Dca44367.1.exon17;Parent=Dca44367.1
scaffold51	Augustus	exon	351545	351880	.	+	.	ID=Dca44367.1.exon18;Parent=Dca44367.1
scaffold51	Augustus	exon	352040	352231	.	+	.	ID=Dca44367.1.exon19;Parent=Dca44367.1
scaffold51	Augustus	exon	352355	352416	.	+	.	ID=Dca44367.1.exon20;Parent=Dca44367.1
scaffold51	Augustus	exon	353132	353210	.	+	.	ID=Dca44367.1.exon21;Parent=Dca44367.1
scaffold51	Augustus	exon	354414	354551	.	+	.	ID=Dca44367.1.exon22;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	354642	354775	.	+	.	ID=Dca44367.1.exon23;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	355113	355233	.	+	.	ID=Dca44367.1.exon24;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	355311	355384	.	+	.	ID=Dca44367.1.exon25;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	355950	356094	.	+	.	ID=Dca44367.1.exon26;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	356390	356539	.	+	.	ID=Dca44367.1.exon27;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	356643	356738	.	+	.	ID=Dca44367.1.exon28;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	356819	356914	.	+	.	ID=Dca44367.1.exon29;Parent=Dca44367.1
scaffold51	Augus-PASA	exon	357037	357239	.	+	.	ID=Dca44367.1.exon30;Parent=Dca44367.1
scaffold51	Augustus	exon	357496	357651	.	+	.	ID=Dca44367.1.exon31;Parent=Dca44367.1
scaffold51	Augustus	exon	357891	358113	.	+	.	ID=Dca44367.1.exon32;Parent=Dca44367.1