Carnation DB

Dca44926.1

Annotation

20-exons
f-1
sp|F6HPP6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g02720#GO:0005509#1F0P0C
AT2G03150.1 | Symbols: emb1579 | ATP/GTP-binding protein family | chr2:952313-959004 FORWARD LENGTH=1340
Repeat List (scaffold5215)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44926.1	422	1383	1388	35.23	962	48	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HPP6_VITVI	381	1400	1402	72.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44926.1	829	1205	1388	10.3	377	37	2e-30
Target_name	Start	End	Length	Cov(%)
AT2G03150.1	756	1122	1340	27.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5215	Augustus	mRNA	7253	21615	.	+	.	ID=Dca44926.1;Parent=Dca44926
scaffold5215	Augustus	exon	7253	7327	.	+	.	ID=Dca44926.1.exon1;Parent=Dca44926.1
scaffold5215	Augustus	exon	7434	7634	.	+	.	ID=Dca44926.1.exon2;Parent=Dca44926.1
scaffold5215	Augustus	exon	9022	9312	.	+	.	ID=Dca44926.1.exon3;Parent=Dca44926.1
scaffold5215	Augustus	exon	11906	12006	.	+	.	ID=Dca44926.1.exon4;Parent=Dca44926.1
scaffold5215	Augustus	exon	12299	13070	.	+	.	ID=Dca44926.1.exon5;Parent=Dca44926.1
scaffold5215	Augustus	exon	13764	13856	.	+	.	ID=Dca44926.1.exon6;Parent=Dca44926.1
scaffold5215	Augustus	exon	13938	13993	.	+	.	ID=Dca44926.1.exon7;Parent=Dca44926.1
scaffold5215	Augustus	exon	14147	14264	.	+	.	ID=Dca44926.1.exon8;Parent=Dca44926.1
scaffold5215	Augustus	exon	15642	15853	.	+	.	ID=Dca44926.1.exon9;Parent=Dca44926.1
scaffold5215	Augustus	exon	16033	16096	.	+	.	ID=Dca44926.1.exon10;Parent=Dca44926.1
scaffold5215	Augustus	exon	17028	17204	.	+	.	ID=Dca44926.1.exon11;Parent=Dca44926.1
scaffold5215	Augustus	exon	18431	18461	.	+	.	ID=Dca44926.1.exon12;Parent=Dca44926.1
scaffold5215	Augustus	exon	18541	19598	.	+	.	ID=Dca44926.1.exon13;Parent=Dca44926.1
scaffold5215	Augus-PASA	exon	19679	19753	.	+	.	ID=Dca44926.1.exon14;Parent=Dca44926.1
scaffold5215	Augus-PASA	exon	19896	19970	.	+	.	ID=Dca44926.1.exon15;Parent=Dca44926.1
scaffold5215	Augus-PASA	exon	20046	20408	.	+	.	ID=Dca44926.1.exon16;Parent=Dca44926.1
scaffold5215	Augus-PASA	exon	20801	21001	.	+	.	ID=Dca44926.1.exon17;Parent=Dca44926.1
scaffold5215	Augus-PASA	exon	21096	21137	.	+	.	ID=Dca44926.1.exon18;Parent=Dca44926.1
scaffold5215	Augus-PASA	exon	21373	21435	.	+	.	ID=Dca44926.1.exon19;Parent=Dca44926.1
scaffold5215	Augus-PASA	exon	21517	21615	.	+	.	ID=Dca44926.1.exon20;Parent=Dca44926.1