Carnation DB

Dca46460.1

Annotation

15-exons
f-1
sp|F6HYD3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g04060#GO:0003723#1F0P0C
sp|B9RQI1_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1492510#GO:0005737;GO:0003824;GO:0003723;GO:0006355;GO:0016070#2F2P1C
Repeat List (scaffold555)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46460.1	10	504	512	51.95	495	52	5e-121
Target_name	Start	End	Length	Cov(%)
sp\|F6HYD3_VITVI	442	943	949	52.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46460.1	36	507	512	45.11	472	49	1e-110
Target_name	Start	End	Length	Cov(%)
AT3G16230.2	19	447	449	95.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold555	Augus-PASA	mRNA	2217	7923	.	-	.	ID=Dca46460.1;Parent=Dca46460
scaffold555	Augus-PASA	exon	2217	2406	.	-	.	ID=Dca46460.1.exon1;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	2532	2575	.	-	.	ID=Dca46460.1.exon2;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	2854	2921	.	-	.	ID=Dca46460.1.exon3;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	3052	3142	.	-	.	ID=Dca46460.1.exon4;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	3256	3321	.	-	.	ID=Dca46460.1.exon5;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	3407	3519	.	-	.	ID=Dca46460.1.exon6;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	4022	4304	.	-	.	ID=Dca46460.1.exon7;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	4590	4657	.	-	.	ID=Dca46460.1.exon8;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	5420	5496	.	-	.	ID=Dca46460.1.exon9;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	5612	5649	.	-	.	ID=Dca46460.1.exon10;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	5908	6107	.	-	.	ID=Dca46460.1.exon11;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	6189	6245	.	-	.	ID=Dca46460.1.exon12;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	6755	6899	.	-	.	ID=Dca46460.1.exon13;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	7733	7796	.	-	.	ID=Dca46460.1.exon14;Parent=Dca46460.1
scaffold555	Augus-PASA	exon	7889	7923	.	-	.	ID=Dca46460.1.exon15;Parent=Dca46460.1