Dca47342.1
Annotation
- 3-exons
- f-1
- sp|Q2HU05_MEDTR#Integrase, catalytic region#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MtrDRAFT_AC149577g2v1#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold575)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47342.1 |
47 |
494 |
515 |
47.57 |
448 |
54 |
1e-136
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2HU05_MEDTR |
1069 |
1520 |
1715 |
26.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47342.1 |
176 |
491 |
515 |
28.54 |
316 |
47 |
7e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
883 |
1198 |
1401 |
22.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold575 |
Augustus |
mRNA |
161 |
1986 |
. |
+ |
. |
ID=Dca47342.1;Parent=Dca47342 |
| scaffold575 |
Augustus |
exon |
161 |
532 |
. |
+ |
. |
ID=Dca47342.1.exon1;Parent=Dca47342.1 |
| scaffold575 |
Augustus |
exon |
681 |
1784 |
. |
+ |
. |
ID=Dca47342.1.exon2;Parent=Dca47342.1 |
| scaffold575 |
Augustus |
exon |
1915 |
1986 |
. |
+ |
. |
ID=Dca47342.1.exon3;Parent=Dca47342.1 |
