Dca4847.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold11831)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4847.1 |
1 |
303 |
354 |
52.25 |
303 |
53 |
3e-104
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1177 |
1526 |
1553 |
22.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4847.1 |
1 |
216 |
354 |
22.59 |
216 |
38 |
1e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1139 |
1353 |
1539 |
13.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11831 |
Augustus |
mRNA |
10412 |
11962 |
. |
- |
. |
ID=Dca4847.1;Parent=Dca4847 |
| scaffold11831 |
Augustus |
exon |
10412 |
10519 |
. |
- |
. |
ID=Dca4847.1.exon1;Parent=Dca4847.1 |
| scaffold11831 |
Augustus |
exon |
10865 |
11141 |
. |
- |
. |
ID=Dca4847.1.exon2;Parent=Dca4847.1 |
| scaffold11831 |
Augustus |
exon |
11283 |
11962 |
. |
- |
. |
ID=Dca4847.1.exon3;Parent=Dca4847.1 |
