Carnation DB

Dca48541.1

Annotation

6-exons
f-1
sp|B9ID38_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_808228#GO:0008168#1F0P0C
sp|B9R9F4_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1496780#GO:0008168#1F0P0C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48541.1	1	620	620	71.77	620	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9ID38_POPTR	1	619	631	98.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48541.1	28	619	620	67.41	592	67	0
Target_name	Start	End	Length	Cov(%)
Os04t0570800-02	18	640	647	96.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	194331	198949	.	+	.	ID=Dca48541.1;Parent=Dca48541
scaffold6	Augustus	exon	194331	195002	.	+	.	ID=Dca48541.1.exon1;Parent=Dca48541.1
scaffold6	Augustus	exon	196787	196997	.	+	.	ID=Dca48541.1.exon2;Parent=Dca48541.1
scaffold6	Augustus	exon	197171	197471	.	+	.	ID=Dca48541.1.exon3;Parent=Dca48541.1
scaffold6	Augustus	exon	197827	198219	.	+	.	ID=Dca48541.1.exon4;Parent=Dca48541.1
scaffold6	Augustus	exon	198580	198657	.	+	.	ID=Dca48541.1.exon5;Parent=Dca48541.1
scaffold6	Augustus	exon	198742	198949	.	+	.	ID=Dca48541.1.exon6;Parent=Dca48541.1
scaffold6	Augustus	mRNA	198080	198949	.	+	.	ID=Dca48541.2;Parent=Dca48541
scaffold6	Augustus	exon	198080	198219	.	+	.	ID=Dca48541.2.exon1;Parent=Dca48541.2
scaffold6	Augustus	exon	198580	198657	.	+	.	ID=Dca48541.2.exon2;Parent=Dca48541.2
scaffold6	Augustus	exon	198742	198949	.	+	.	ID=Dca48541.2.exon3;Parent=Dca48541.2