Carnation DB

Dca48573.1

Annotation

13-exons
f-1
sp|F6H080_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14110#GO:0005667;GO:0003677;GO:0003700;GO:0006351#2F1P1C
sp|B9R878_RICCO#E2F4,5, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1597450#GO:0005667;GO:0003677;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48573.1	49	347	347	37.17	299	42	1e-57
Target_name	Start	End	Length	Cov(%)
sp\|F6H080_VITVI	96	404	449	68.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48573.1	94	346	347	33.14	253	46	6e-54
Target_name	Start	End	Length	Cov(%)
AT1G47870.1	150	392	396	61.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	476719	479711	.	+	.	ID=Dca48573.1;Parent=Dca48573
scaffold6	Augustus	exon	476719	476820	.	+	.	ID=Dca48573.1.exon1;Parent=Dca48573.1
scaffold6	Augustus	exon	477179	477344	.	+	.	ID=Dca48573.1.exon2;Parent=Dca48573.1
scaffold6	Augustus	exon	477448	477492	.	+	.	ID=Dca48573.1.exon3;Parent=Dca48573.1
scaffold6	Augustus	exon	477606	477691	.	+	.	ID=Dca48573.1.exon4;Parent=Dca48573.1
scaffold6	Augustus	exon	477897	477985	.	+	.	ID=Dca48573.1.exon5;Parent=Dca48573.1
scaffold6	Augustus	exon	478080	478131	.	+	.	ID=Dca48573.1.exon6;Parent=Dca48573.1
scaffold6	Augustus	exon	478314	478366	.	+	.	ID=Dca48573.1.exon7;Parent=Dca48573.1
scaffold6	Augustus	exon	478448	478498	.	+	.	ID=Dca48573.1.exon8;Parent=Dca48573.1
scaffold6	Augustus	exon	478584	478632	.	+	.	ID=Dca48573.1.exon9;Parent=Dca48573.1
scaffold6	Augustus	exon	478728	478793	.	+	.	ID=Dca48573.1.exon10;Parent=Dca48573.1
scaffold6	Augustus	exon	478896	478972	.	+	.	ID=Dca48573.1.exon11;Parent=Dca48573.1
scaffold6	Augustus	exon	479082	479214	.	+	.	ID=Dca48573.1.exon12;Parent=Dca48573.1
scaffold6	Augustus	exon	479637	479711	.	+	.	ID=Dca48573.1.exon13;Parent=Dca48573.1