Dca48819.1
Annotation
- 4-exons
- f-1
- sp|B9RKC7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1048230#unknown#0F0P0C
- Os01t0558800-01 Similar to oxidoreductase/ transition metal ion binding protein.
- Repeat List (scaffold6041)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48819.1 |
47 |
219 |
219 |
48.85 |
173 |
43 |
2e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RKC7_RICCO |
53 |
300 |
300 |
82.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48819.1 |
110 |
219 |
219 |
31.5 |
110 |
52 |
3e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G29400.1 |
169 |
302 |
302 |
44.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6041 |
Augustus |
mRNA |
2760 |
5639 |
. |
+ |
. |
ID=Dca48819.1;Parent=Dca48819 |
| scaffold6041 |
Augustus |
exon |
2760 |
3134 |
. |
+ |
. |
ID=Dca48819.1.exon1;Parent=Dca48819.1 |
| scaffold6041 |
Augustus |
exon |
4527 |
4586 |
. |
+ |
. |
ID=Dca48819.1.exon2;Parent=Dca48819.1 |
| scaffold6041 |
Augustus |
exon |
4905 |
5026 |
. |
+ |
. |
ID=Dca48819.1.exon3;Parent=Dca48819.1 |
| scaffold6041 |
Augustus |
exon |
5537 |
5639 |
. |
+ |
. |
ID=Dca48819.1.exon4;Parent=Dca48819.1 |
