Dca49536.1
Annotation
- 4-exons
- f-1
- sp|A5BCN9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_038874#GO:0005634#0F0P1C
- sp|A8Y911_POPTR#D3-type cyclin#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CYCD3#GO:0005634#0F0P1C
- Repeat List (scaffold62)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49536.1 |
1 |
382 |
382 |
50.26 |
382 |
49 |
1e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCN9_VITVI |
1 |
372 |
372 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49536.1 |
6 |
310 |
382 |
41.36 |
305 |
51 |
2e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G34160.1 |
11 |
319 |
376 |
82.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold62 |
Augustus |
mRNA |
288275 |
292712 |
. |
+ |
. |
ID=Dca49536.1;Parent=Dca49536 |
| scaffold62 |
Augustus |
exon |
288275 |
288730 |
. |
+ |
. |
ID=Dca49536.1.exon1;Parent=Dca49536.1 |
| scaffold62 |
Augustus |
exon |
289080 |
289281 |
. |
+ |
. |
ID=Dca49536.1.exon2;Parent=Dca49536.1 |
| scaffold62 |
Augus-PASA |
exon |
289772 |
289902 |
. |
+ |
. |
ID=Dca49536.1.exon3;Parent=Dca49536.1 |
| scaffold62 |
Augus-PASA |
exon |
292353 |
292712 |
. |
+ |
. |
ID=Dca49536.1.exon4;Parent=Dca49536.1 |
