Dca50008.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6308)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50008.1 |
2 |
271 |
271 |
69 |
270 |
62 |
2e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
94 |
398 |
964 |
31.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50008.1 |
14 |
235 |
271 |
28.78 |
222 |
35 |
6e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
552 |
779 |
1428 |
15.96 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6308 |
Augustus |
mRNA |
14392 |
15304 |
. |
+ |
. |
ID=Dca50008.1;Parent=Dca50008 |
| scaffold6308 |
Augustus |
exon |
14392 |
14479 |
. |
+ |
. |
ID=Dca50008.1.exon1;Parent=Dca50008.1 |
| scaffold6308 |
Augustus |
exon |
14577 |
15304 |
. |
+ |
. |
ID=Dca50008.1.exon2;Parent=Dca50008.1 |
