Dca50445.1
Annotation
- 2-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold6403)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50445.1 |
9 |
766 |
766 |
40.86 |
758 |
39 |
3e-157
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
88 |
883 |
1365 |
58.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50445.1 |
15 |
762 |
766 |
31.85 |
748 |
32 |
8e-104
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
18 |
789 |
857 |
90.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6403 |
Augustus |
mRNA |
13948 |
16368 |
. |
- |
. |
ID=Dca50445.1;Parent=Dca50445 |
| scaffold6403 |
Augustus |
exon |
13948 |
15354 |
. |
- |
. |
ID=Dca50445.1.exon1;Parent=Dca50445.1 |
| scaffold6403 |
Augustus |
exon |
15475 |
16368 |
. |
- |
. |
ID=Dca50445.1.exon2;Parent=Dca50445.1 |
