Dca50608.1
Annotation
- 2-exons
- f-1
- sp|Q9SL12_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold645)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50608.1 |
1 |
251 |
272 |
27.94 |
251 |
30 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SL12_ARATH |
372 |
618 |
977 |
25.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50608.1 |
194 |
254 |
272 |
9.19 |
61 |
41 |
4e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
524 |
584 |
626 |
9.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold645 |
Augustus |
mRNA |
20725 |
21782 |
. |
- |
. |
ID=Dca50608.1;Parent=Dca50608 |
| scaffold645 |
Augustus |
exon |
20725 |
20987 |
. |
- |
. |
ID=Dca50608.1.exon1;Parent=Dca50608.1 |
| scaffold645 |
Augustus |
exon |
21227 |
21782 |
. |
- |
. |
ID=Dca50608.1.exon2;Parent=Dca50608.1 |
