Dca50735.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6482)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50735.1 |
79 |
274 |
274 |
42.33 |
196 |
59 |
3e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
351 |
549 |
964 |
20.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50735.1 |
158 |
268 |
274 |
18.61 |
111 |
46 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
880 |
987 |
1401 |
7.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6482 |
Augustus |
mRNA |
11490 |
15368 |
. |
- |
. |
ID=Dca50735.1;Parent=Dca50735 |
| scaffold6482 |
Augustus |
exon |
11490 |
12095 |
. |
- |
. |
ID=Dca50735.1.exon1;Parent=Dca50735.1 |
| scaffold6482 |
Augustus |
exon |
15150 |
15368 |
. |
- |
. |
ID=Dca50735.1.exon2;Parent=Dca50735.1 |
