Carnation DB

Dca50835.1

Annotation

5-exons
f-1
sp|F1JYZ5_SOLLC#Autophagy 8a#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#unknown#0F0P0C
Repeat List (scaffold650)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50835.1	1	118	130	86.92	118	96	8e-62
Target_name	Start	End	Length	Cov(%)
sp\|F1JYZ5_SOLLC	1	118	119	99.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50835.1	1	117	130	83.84	117	94	8e-61
Target_name	Start	End	Length	Cov(%)
Os08t0191600-01	1	117	121	96.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold650	Augustus	mRNA	39257	41398	.	+	.	ID=Dca50835.1;Parent=Dca50835
scaffold650	Augustus	exon	39257	39293	.	+	.	ID=Dca50835.1.exon1;Parent=Dca50835.1
scaffold650	Augus-PASA	exon	40216	40271	.	+	.	ID=Dca50835.1.exon2;Parent=Dca50835.1
scaffold650	Augus-PASA	exon	40356	40408	.	+	.	ID=Dca50835.1.exon3;Parent=Dca50835.1
scaffold650	Augus-PASA	exon	41063	41181	.	+	.	ID=Dca50835.1.exon4;Parent=Dca50835.1
scaffold650	Augus-PASA	exon	41271	41398	.	+	.	ID=Dca50835.1.exon5;Parent=Dca50835.1