Carnation DB

Dca51195.1

Annotation

8-exons
f-1
sp|B9N2Z1_POPTR#Porin/voltage-dependent anion-selective channel protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580465#GO:0005741;GO:0008308#1F0P1C
Repeat List (scaffold66)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51195.1	44	314	314	57.64	271	67	5e-107
Target_name	Start	End	Length	Cov(%)
sp\|B9N2Z1_POPTR	5	275	275	98.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51195.1	43	314	314	51.59	272	60	8e-93
Target_name	Start	End	Length	Cov(%)
AT5G57490.1	4	274	274	98.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold66	Augustus	mRNA	89671	97749	.	+	.	ID=Dca51195.1;Parent=Dca51195
scaffold66	Augustus	exon	89671	89677	.	+	.	ID=Dca51195.1.exon1;Parent=Dca51195.1
scaffold66	Augustus	exon	93296	93374	.	+	.	ID=Dca51195.1.exon2;Parent=Dca51195.1
scaffold66	Augus-PASA	exon	93972	94051	.	+	.	ID=Dca51195.1.exon3;Parent=Dca51195.1
scaffold66	Augus-PASA	exon	94960	95027	.	+	.	ID=Dca51195.1.exon4;Parent=Dca51195.1
scaffold66	Augus-PASA	exon	95598	95708	.	+	.	ID=Dca51195.1.exon5;Parent=Dca51195.1
scaffold66	Augus-PASA	exon	95854	95940	.	+	.	ID=Dca51195.1.exon6;Parent=Dca51195.1
scaffold66	Augus-PASA	exon	96583	96791	.	+	.	ID=Dca51195.1.exon7;Parent=Dca51195.1
scaffold66	Augus-PASA	exon	97446	97749	.	+	.	ID=Dca51195.1.exon8;Parent=Dca51195.1