Carnation DB

Dca51619.1

Annotation

5-exons
f-1
sp|A9PGT9_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005488#1F0P0C
AT4G20900.1 | Symbols: MS5, TDM1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11184103-11185844 REVERSE LENGTH=450
Repeat List (scaffold670)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51619.1	1	336	480	37.91	336	54	5e-96
Target_name	Start	End	Length	Cov(%)
sp\|A9PGT9_POPTR	1	313	690	45.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51619.1	8	306	480	32.7	299	53	1e-80
Target_name	Start	End	Length	Cov(%)
AT4G20900.1	6	297	450	64.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold670	Augustus	mRNA	116680	119018	.	+	.	ID=Dca51619.1;Parent=Dca51619
scaffold670	Augustus	exon	116680	116901	.	+	.	ID=Dca51619.1.exon1;Parent=Dca51619.1
scaffold670	Augustus	exon	117433	117645	.	+	.	ID=Dca51619.1.exon2;Parent=Dca51619.1
scaffold670	Augustus	exon	117856	118004	.	+	.	ID=Dca51619.1.exon3;Parent=Dca51619.1
scaffold670	Augustus	exon	118084	118221	.	+	.	ID=Dca51619.1.exon4;Parent=Dca51619.1
scaffold670	Augustus	exon	118298	119018	.	+	.	ID=Dca51619.1.exon5;Parent=Dca51619.1