Carnation DB

Dca51689.1

Annotation

6-exons
f-3
sp|B9GPA1_POPTR#Ribosomal protein L15#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_709743, POPTRDRAFT_836394#GO:0003735;GO:0006412#1F1P0C
Repeat List (scaffold672)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51689.1	1	143	327	33.33	143	77	2e-53
Target_name	Start	End	Length	Cov(%)
sp\|B9GPA1_POPTR	3	143	204	69.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51689.1	1	112	327	30.88	112	91	4e-43
Target_name	Start	End	Length	Cov(%)
Os03t0598800-02	3	114	205	54.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold672	Augustus	mRNA	24509	28438	.	+	.	ID=Dca51689.1;Parent=Dca51689
scaffold672	Augustus	exon	24509	24675	.	+	.	ID=Dca51689.1.exon1;Parent=Dca51689.1
scaffold672	Augustus	exon	25601	25771	.	+	.	ID=Dca51689.1.exon2;Parent=Dca51689.1
scaffold672	Augustus	exon	25985	26021	.	+	.	ID=Dca51689.1.exon3;Parent=Dca51689.1
scaffold672	Augus-PASA	exon	26149	26315	.	+	.	ID=Dca51689.1.exon4;Parent=Dca51689.1
scaffold672	Augus-PASA	exon	27235	27432	.	+	.	ID=Dca51689.1.exon5;Parent=Dca51689.1
scaffold672	Augus-PASA	exon	28193	28438	.	+	.	ID=Dca51689.1.exon6;Parent=Dca51689.1