Carnation DB

Dca51691.1

Annotation

7-exons
f-1
sp|B9GYC8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817169#GO:0000166;GO:0016491#2F0P0C
sp|B9SXD9_RICCO#Oxidoreductase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1388970#GO:0050112;GO:0000166#2F0P0C
Repeat List (scaffold672)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51691.1	1	371	372	79.56	371	80	3e-179
Target_name	Start	End	Length	Cov(%)
sp\|B9GYC8_POPTR	1	371	376	98.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51691.1	8	371	372	74.19	364	76	2e-165
Target_name	Start	End	Length	Cov(%)
AT4G17370.1	7	368	368	98.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold672	Augus-PASA	mRNA	44127	46625	.	-	.	ID=Dca51691.1;Parent=Dca51691
scaffold672	Augus-PASA	exon	44127	44316	.	-	.	ID=Dca51691.1.exon1;Parent=Dca51691.1
scaffold672	Augus-PASA	exon	44519	44616	.	-	.	ID=Dca51691.1.exon2;Parent=Dca51691.1
scaffold672	Augus-PASA	exon	44833	44967	.	-	.	ID=Dca51691.1.exon3;Parent=Dca51691.1
scaffold672	Augus-PASA	exon	45097	45261	.	-	.	ID=Dca51691.1.exon4;Parent=Dca51691.1
scaffold672	Augus-PASA	exon	45341	45505	.	-	.	ID=Dca51691.1.exon5;Parent=Dca51691.1
scaffold672	Augus-PASA	exon	45946	46116	.	-	.	ID=Dca51691.1.exon6;Parent=Dca51691.1
scaffold672	Augus-PASA	exon	46431	46625	.	-	.	ID=Dca51691.1.exon7;Parent=Dca51691.1