Dca51810.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2QTV1_ORYSJ#Transposable element protein, putative, Retrotrans_gag#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g18420#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold6750)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51810.1 |
73 |
328 |
763 |
13.23 |
256 |
40 |
8e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
261 |
1717 |
14.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51810.1 |
430 |
522 |
763 |
3.8 |
93 |
32 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6750 |
Augustus |
mRNA |
3271 |
5904 |
. |
+ |
. |
ID=Dca51810.1;Parent=Dca51810 |
| scaffold6750 |
Augustus |
exon |
3271 |
4305 |
. |
+ |
. |
ID=Dca51810.1.exon1;Parent=Dca51810.1 |
| scaffold6750 |
Augustus |
exon |
4648 |
5904 |
. |
+ |
. |
ID=Dca51810.1.exon2;Parent=Dca51810.1 |
