Carnation DB

Dca51937.1

Annotation

5-exons
f-1
sp|Q3HVK4_SOLTU#40S ribosomal protein S6#Solanum tuberosum (Potato)#unknown#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold679)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51937.1	1	249	250	90.4	249	91	9e-128
Target_name	Start	End	Length	Cov(%)
sp\|Q3HVK4_SOLTU	1	249	249	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51937.1	1	243	250	88.8	243	92	1e-127
Target_name	Start	End	Length	Cov(%)
Os03t0390000-02	1	243	246	98.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold679	Augustus	mRNA	101511	103651	.	-	.	ID=Dca51937.1;Parent=Dca51937
scaffold679	Augustus	exon	101511	101752	.	-	.	ID=Dca51937.1.exon1;Parent=Dca51937.1
scaffold679	Augustus	exon	101999	102271	.	-	.	ID=Dca51937.1.exon2;Parent=Dca51937.1
scaffold679	Augustus	exon	102376	102484	.	-	.	ID=Dca51937.1.exon3;Parent=Dca51937.1
scaffold679	Augustus	exon	102579	102636	.	-	.	ID=Dca51937.1.exon4;Parent=Dca51937.1
scaffold679	Augustus	exon	103581	103651	.	-	.	ID=Dca51937.1.exon5;Parent=Dca51937.1