Carnation DB

Dca52149.1

Annotation

6-exons
f-1
sp|B9N8Z3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_786585#unknown#0F0P0C
Os12t0533500-01 Similar to VIL1 protein.
Repeat List (scaffold683)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52149.1	133	356	392	31.37	224	55	2e-65
Target_name	Start	End	Length	Cov(%)
sp\|B9N8Z3_POPTR	96	317	612	36.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52149.1	153	356	392	26.27	204	50	3e-52
Target_name	Start	End	Length	Cov(%)
Os12t0533500-01	235	435	708	28.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold683	Augustus	mRNA	105134	109245	.	+	.	ID=Dca52149.1;Parent=Dca52149
scaffold683	Augustus	exon	105134	105238	.	+	.	ID=Dca52149.1.exon1;Parent=Dca52149.1
scaffold683	Augustus	exon	107233	107392	.	+	.	ID=Dca52149.1.exon2;Parent=Dca52149.1
scaffold683	Augustus	exon	107755	107857	.	+	.	ID=Dca52149.1.exon3;Parent=Dca52149.1
scaffold683	Augustus	exon	108010	108093	.	+	.	ID=Dca52149.1.exon4;Parent=Dca52149.1
scaffold683	Augustus	exon	108421	108731	.	+	.	ID=Dca52149.1.exon5;Parent=Dca52149.1
scaffold683	Augustus	exon	108830	109245	.	+	.	ID=Dca52149.1.exon6;Parent=Dca52149.1