Carnation DB

Dca5235.1

Annotation

5-exons
f-1
sp|B9H6P1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818430#GO:0003824#1F0P0C
sp|B9T6U0_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0270690#GO:0003824#1F0P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5235.1	1	237	242	72.72	237	74	2e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9H6P1_POPTR	1	240	246	97.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5235.1	7	237	242	63.63	231	67	1e-97
Target_name	Start	End	Length	Cov(%)
AT2G22570.1	9	240	244	95.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	455155	457366	.	-	.	ID=Dca5235.1;Parent=Dca5235
scaffold12	Augustus	exon	455155	455238	.	-	.	ID=Dca5235.1.exon1;Parent=Dca5235.1
scaffold12	Augustus	exon	455352	455537	.	-	.	ID=Dca5235.1.exon2;Parent=Dca5235.1
scaffold12	Augustus	exon	455974	456107	.	-	.	ID=Dca5235.1.exon3;Parent=Dca5235.1
scaffold12	Augustus	exon	456638	456821	.	-	.	ID=Dca5235.1.exon4;Parent=Dca5235.1
scaffold12	Augustus	exon	457226	457366	.	-	.	ID=Dca5235.1.exon5;Parent=Dca5235.1