Dca52403.1
Annotation
- 4-exons
- f-1
- sp|B9IPX4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_738571#GO:0005506#1F0P0C
- sp|D7LWX8_ARALL#Rubredoxin family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488578#GO:0005506#1F0P0C
- Repeat List (scaffold690)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52403.1 |
1 |
265 |
265 |
73.96 |
265 |
71 |
3e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IPX4_POPTR |
1 |
275 |
275 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52403.1 |
25 |
265 |
265 |
69.81 |
241 |
77 |
1e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G17170.1 |
35 |
271 |
271 |
87.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold690 |
Augus-PASA |
mRNA |
23373 |
24436 |
. |
- |
. |
ID=Dca52403.1;Parent=Dca52403 |
| scaffold690 |
Augus-PASA |
exon |
23373 |
23612 |
. |
- |
. |
ID=Dca52403.1.exon1;Parent=Dca52403.1 |
| scaffold690 |
Augus-PASA |
exon |
23726 |
23977 |
. |
- |
. |
ID=Dca52403.1.exon2;Parent=Dca52403.1 |
| scaffold690 |
Augus-PASA |
exon |
24054 |
24275 |
. |
- |
. |
ID=Dca52403.1.exon3;Parent=Dca52403.1 |
| scaffold690 |
Augus-PASA |
exon |
24353 |
24436 |
. |
- |
. |
ID=Dca52403.1.exon4;Parent=Dca52403.1 |
