Carnation DB

Dca53616.1

Annotation

6-exons
f-1
sp|A5B890_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_018653#unknown#0F0P0C
sp|B9RI88_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1577230#unknown#0F0P0C
Repeat List (scaffold72)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53616.1	37	414	454	40.52	378	45	8e-71
Target_name	Start	End	Length	Cov(%)
sp\|A5B890_VITVI	17	422	446	91.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53616.1	9	414	454	33.25	406	37	1e-48
Target_name	Start	End	Length	Cov(%)
AT1G51140.1	1	364	379	96.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold72	Augustus	mRNA	61158	65017	.	-	.	ID=Dca53616.1;Parent=Dca53616
scaffold72	Augustus	exon	61158	61277	.	-	.	ID=Dca53616.1.exon1;Parent=Dca53616.1
scaffold72	Augustus	exon	63101	63169	.	-	.	ID=Dca53616.1.exon2;Parent=Dca53616.1
scaffold72	Augustus	exon	63281	63346	.	-	.	ID=Dca53616.1.exon3;Parent=Dca53616.1
scaffold72	Augustus	exon	63503	63673	.	-	.	ID=Dca53616.1.exon4;Parent=Dca53616.1
scaffold72	Augustus	exon	63759	64048	.	-	.	ID=Dca53616.1.exon5;Parent=Dca53616.1
scaffold72	Augustus	exon	64369	65017	.	-	.	ID=Dca53616.1.exon6;Parent=Dca53616.1