Dca53975.1
Annotation
- 3-exons
- f-1
- sp|O22148_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g45230#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold73)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53975.1 |
1 |
199 |
486 |
18.31 |
199 |
45 |
2e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O22148_ARATH |
525 |
723 |
1374 |
14.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53975.1 |
1 |
200 |
486 |
13.16 |
200 |
32 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
445 |
643 |
857 |
23.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold73 |
Augustus |
mRNA |
258992 |
261612 |
. |
- |
. |
ID=Dca53975.1;Parent=Dca53975 |
| scaffold73 |
Augustus |
exon |
258992 |
259494 |
. |
- |
. |
ID=Dca53975.1.exon1;Parent=Dca53975.1 |
| scaffold73 |
Augustus |
exon |
260208 |
260495 |
. |
- |
. |
ID=Dca53975.1.exon2;Parent=Dca53975.1 |
| scaffold73 |
Augustus |
exon |
260943 |
261612 |
. |
- |
. |
ID=Dca53975.1.exon3;Parent=Dca53975.1 |
