Carnation DB

Dca5423.1

Annotation

9-exons
f-1
sp|C6T884_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0006370#0F1P0C
sp|B9T6R7_RICCO#mRNA (Guanine-7-)methyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0008260#GO:0004482;GO:0006370#1F1P0C
Repeat List (scaffold1207)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5423.1	189	294	300	22	106	63	2e-34
Target_name	Start	End	Length	Cov(%)
sp\|C6T884_SOYBN	31	135	231	45.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5423.1	189	293	300	19.33	105	56	9e-30
Target_name	Start	End	Length	Cov(%)
Os02t0780600-02	31	135	340	30.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1207	Augustus	mRNA	51887	55778	.	+	.	ID=Dca5423.1;Parent=Dca5423
scaffold1207	Augustus	exon	51887	52097	.	+	.	ID=Dca5423.1.exon1;Parent=Dca5423.1
scaffold1207	Augustus	exon	52530	52651	.	+	.	ID=Dca5423.1.exon2;Parent=Dca5423.1
scaffold1207	Augus-PASA	exon	53300	53342	.	+	.	ID=Dca5423.1.exon3;Parent=Dca5423.1
scaffold1207	Augus-PASA	exon	53434	53495	.	+	.	ID=Dca5423.1.exon4;Parent=Dca5423.1
scaffold1207	Augustus	exon	53720	53811	.	+	.	ID=Dca5423.1.exon5;Parent=Dca5423.1
scaffold1207	Augus-PASA	exon	54993	55096	.	+	.	ID=Dca5423.1.exon6;Parent=Dca5423.1
scaffold1207	Augus-PASA	exon	55198	55292	.	+	.	ID=Dca5423.1.exon7;Parent=Dca5423.1
scaffold1207	Augus-PASA	exon	55516	55587	.	+	.	ID=Dca5423.1.exon8;Parent=Dca5423.1
scaffold1207	Augus-PASA	exon	55677	55778	.	+	.	ID=Dca5423.1.exon9;Parent=Dca5423.1