Carnation DB

Dca54831.1

Annotation

20-exons
f-1
sp|B9FXB1_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_24304#GO:0005524;GO:0004003;GO:0003677#3F0P0C
AT4G25120.1 | Symbols: SRS2, ATSRS2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:12890694-12898309 FORWARD LENGTH=1149
Repeat List (scaffold755)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54831.1	194	289	851	4.34	96	34	5e-06
Target_name	Start	End	Length	Cov(%)
sp\|B9FXB1_ORYSJ	220	327	1186	9.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54831.1	25	289	851	10.69	265	31	2e-19
Target_name	Start	End	Length	Cov(%)
AT4G25120.1	18	287	1149	23.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold755	Augustus	mRNA	11523	29391	.	+	.	ID=Dca54831.1;Parent=Dca54831
scaffold755	Augustus	exon	11523	11674	.	+	.	ID=Dca54831.1.exon1;Parent=Dca54831.1
scaffold755	Augustus	exon	13546	14249	.	+	.	ID=Dca54831.1.exon2;Parent=Dca54831.1
scaffold755	Augustus	exon	16541	16674	.	+	.	ID=Dca54831.1.exon3;Parent=Dca54831.1
scaffold755	Augustus	exon	17135	17260	.	+	.	ID=Dca54831.1.exon4;Parent=Dca54831.1
scaffold755	Augustus	exon	17373	17504	.	+	.	ID=Dca54831.1.exon5;Parent=Dca54831.1
scaffold755	Augustus	exon	17590	17673	.	+	.	ID=Dca54831.1.exon6;Parent=Dca54831.1
scaffold755	Augustus	exon	18508	18621	.	+	.	ID=Dca54831.1.exon7;Parent=Dca54831.1
scaffold755	Augustus	exon	18779	18879	.	+	.	ID=Dca54831.1.exon8;Parent=Dca54831.1
scaffold755	Augustus	exon	18966	19023	.	+	.	ID=Dca54831.1.exon9;Parent=Dca54831.1
scaffold755	Augustus	exon	19505	19555	.	+	.	ID=Dca54831.1.exon10;Parent=Dca54831.1
scaffold755	Augustus	exon	20419	20478	.	+	.	ID=Dca54831.1.exon11;Parent=Dca54831.1
scaffold755	Augustus	exon	20598	20807	.	+	.	ID=Dca54831.1.exon12;Parent=Dca54831.1
scaffold755	Augustus	exon	22300	22338	.	+	.	ID=Dca54831.1.exon13;Parent=Dca54831.1
scaffold755	Augustus	exon	24602	24771	.	+	.	ID=Dca54831.1.exon14;Parent=Dca54831.1
scaffold755	Augus-PASA	exon	25073	25166	.	+	.	ID=Dca54831.1.exon15;Parent=Dca54831.1
scaffold755	Augus-PASA	exon	26017	26067	.	+	.	ID=Dca54831.1.exon16;Parent=Dca54831.1
scaffold755	Augus-PASA	exon	27293	27355	.	+	.	ID=Dca54831.1.exon17;Parent=Dca54831.1
scaffold755	Augus-PASA	exon	27551	27610	.	+	.	ID=Dca54831.1.exon18;Parent=Dca54831.1
scaffold755	Augus-PASA	exon	28192	28254	.	+	.	ID=Dca54831.1.exon19;Parent=Dca54831.1
scaffold755	Augus-PASA	exon	29302	29391	.	+	.	ID=Dca54831.1.exon20;Parent=Dca54831.1