Dca54926.1
Annotation
- 2-exons
- f-1
- sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- sp|Q9FG26_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0004523;GO:0003964#3F0P0C
- Repeat List (scaffold758)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54926.1 |
2 |
287 |
289 |
41.17 |
286 |
38 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH2_BETVU |
1059 |
1376 |
1378 |
23.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54926.1 |
58 |
229 |
289 |
19.37 |
172 |
33 |
9e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G42905.1 |
81 |
249 |
258 |
65.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold758 |
Augustus |
mRNA |
36254 |
37225 |
. |
+ |
. |
ID=Dca54926.1;Parent=Dca54926 |
| scaffold758 |
Augustus |
exon |
36254 |
36414 |
. |
+ |
. |
ID=Dca54926.1.exon1;Parent=Dca54926.1 |
| scaffold758 |
Augustus |
exon |
36517 |
37225 |
. |
+ |
. |
ID=Dca54926.1.exon2;Parent=Dca54926.1 |
