Carnation DB

Dca54929.1

Annotation

8-exons
f-1
sp|D7SWK6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g03100#unknown#0F0P0C
AT5G64520.1 | Symbols: XRCC2, ATXRCC2 | homolog of X-ray repair cross complementing 2 (XRCC2) | chr5:25788069-25790204 FORWARD LENGTH=372
Repeat List (scaffold758)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54929.1	19	334	354	48.87	316	52	4e-87
Target_name	Start	End	Length	Cov(%)
sp\|D7SWK6_VITVI	1	324	325	99.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54929.1	1	329	354	42.37	329	45	2e-75
Target_name	Start	End	Length	Cov(%)
AT5G64520.1	1	336	372	90.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold758	Augustus	mRNA	80582	84164	.	+	.	ID=Dca54929.1;Parent=Dca54929
scaffold758	Augustus	exon	80582	80767	.	+	.	ID=Dca54929.1.exon1;Parent=Dca54929.1
scaffold758	Augustus	exon	80869	81016	.	+	.	ID=Dca54929.1.exon2;Parent=Dca54929.1
scaffold758	Augustus	exon	81363	81499	.	+	.	ID=Dca54929.1.exon3;Parent=Dca54929.1
scaffold758	Augustus	exon	81761	81828	.	+	.	ID=Dca54929.1.exon4;Parent=Dca54929.1
scaffold758	Augustus	exon	82240	82302	.	+	.	ID=Dca54929.1.exon5;Parent=Dca54929.1
scaffold758	Augustus	exon	82454	82591	.	+	.	ID=Dca54929.1.exon6;Parent=Dca54929.1
scaffold758	Augustus	exon	82980	83082	.	+	.	ID=Dca54929.1.exon7;Parent=Dca54929.1
scaffold758	Augustus	exon	83943	84164	.	+	.	ID=Dca54929.1.exon8;Parent=Dca54929.1