Carnation DB

Dca55013.1

Annotation

12-exons
f-1
sp|B9HNJ6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_804415#unknown#0F0P0C
AT2G26770.1 | Symbols: | plectin-related | chr2:11404257-11407743 REVERSE LENGTH=496
Repeat List (scaffold76)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55013.1	1	493	493	72.21	493	73	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HNJ6_POPTR	1	494	494	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55013.1	1	489	493	69.57	489	70	0
Target_name	Start	End	Length	Cov(%)
AT2G26770.1	1	490	496	98.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold76	Augustus	mRNA	219068	223480	.	+	.	ID=Dca55013.1;Parent=Dca55013
scaffold76	Augustus	exon	219068	219346	.	+	.	ID=Dca55013.1.exon1;Parent=Dca55013.1
scaffold76	Augus-PASA	exon	219471	219599	.	+	.	ID=Dca55013.1.exon2;Parent=Dca55013.1
scaffold76	Augus-PASA	exon	219939	220031	.	+	.	ID=Dca55013.1.exon3;Parent=Dca55013.1
scaffold76	Augus-PASA	exon	220364	220504	.	+	.	ID=Dca55013.1.exon4;Parent=Dca55013.1
scaffold76	Augustus	exon	220854	220922	.	+	.	ID=Dca55013.1.exon5;Parent=Dca55013.1
scaffold76	Augustus	exon	221030	221113	.	+	.	ID=Dca55013.1.exon6;Parent=Dca55013.1
scaffold76	Augustus	exon	221604	221784	.	+	.	ID=Dca55013.1.exon7;Parent=Dca55013.1
scaffold76	Augustus	exon	222213	222329	.	+	.	ID=Dca55013.1.exon8;Parent=Dca55013.1
scaffold76	Augus-PASA	exon	222444	222502	.	+	.	ID=Dca55013.1.exon9;Parent=Dca55013.1
scaffold76	Augus-PASA	exon	222942	223076	.	+	.	ID=Dca55013.1.exon10;Parent=Dca55013.1
scaffold76	Augus-PASA	exon	223185	223334	.	+	.	ID=Dca55013.1.exon11;Parent=Dca55013.1
scaffold76	Augus-PASA	exon	223436	223480	.	+	.	ID=Dca55013.1.exon12;Parent=Dca55013.1