Carnation DB

Dca55331.1

Annotation

5-exons
f-1
sp|B9HYD2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_226650#GO:0008725;GO:0006284#1F1P0C
sp|B9RPY8_RICCO#DNA-3-methyladenine glycosylase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1141650#GO:0008725;GO:0006284#1F1P0C
Repeat List (scaffold77)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55331.1	3	378	382	59.42	376	57	2e-117
Target_name	Start	End	Length	Cov(%)
sp\|B9HYD2_POPTR	9	401	401	98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55331.1	102	378	382	44.24	277	61	5e-91
Target_name	Start	End	Length	Cov(%)
AT3G12710.1	46	310	312	84.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold77	Augus-PASA	mRNA	51039	53315	.	+	.	ID=Dca55331.1;Parent=Dca55331
scaffold77	Augus-PASA	exon	51039	51636	.	+	.	ID=Dca55331.1.exon1;Parent=Dca55331.1
scaffold77	Augus-PASA	exon	51767	51824	.	+	.	ID=Dca55331.1.exon2;Parent=Dca55331.1
scaffold77	Augus-PASA	exon	52009	52092	.	+	.	ID=Dca55331.1.exon3;Parent=Dca55331.1
scaffold77	Augus-PASA	exon	52237	52372	.	+	.	ID=Dca55331.1.exon4;Parent=Dca55331.1
scaffold77	Augus-PASA	exon	53043	53315	.	+	.	ID=Dca55331.1.exon5;Parent=Dca55331.1