Dca55487.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7730)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55487.1 |
2 |
269 |
410 |
44.87 |
268 |
61 |
2e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1193 |
1494 |
1553 |
19.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55487.1 |
79 |
269 |
410 |
20.97 |
191 |
46 |
1e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
9 |
199 |
230 |
83.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7730 |
Augustus |
mRNA |
24825 |
28740 |
. |
+ |
. |
ID=Dca55487.1;Parent=Dca55487 |
| scaffold7730 |
Augustus |
exon |
24825 |
25020 |
. |
+ |
. |
ID=Dca55487.1.exon1;Parent=Dca55487.1 |
| scaffold7730 |
Augustus |
exon |
25123 |
25733 |
. |
+ |
. |
ID=Dca55487.1.exon2;Parent=Dca55487.1 |
| scaffold7730 |
Augustus |
exon |
27207 |
27301 |
. |
+ |
. |
ID=Dca55487.1.exon3;Parent=Dca55487.1 |
| scaffold7730 |
Augustus |
exon |
28410 |
28740 |
. |
+ |
. |
ID=Dca55487.1.exon4;Parent=Dca55487.1 |
