Dca5563.1
Annotation
- 4-exons
- f-1
- sp|B9IA93_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572894#unknown#0F0P0C
- AT1G10830.1 | Symbols: Z-ISO, Z-ISO1.1 | 15-cis-zeta-carotene isomerase | chr1:3605736-3607449 REVERSE LENGTH=367
- Repeat List (scaffold1213)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5563.1 |
1 |
364 |
364 |
70.87 |
364 |
69 |
4e-144
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IA93_POPTR |
1 |
374 |
374 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5563.1 |
20 |
364 |
364 |
64.01 |
345 |
68 |
2e-139
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G10830.1 |
22 |
367 |
367 |
94.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1213 |
Augus-PASA |
mRNA |
61502 |
63113 |
. |
+ |
. |
ID=Dca5563.1;Parent=Dca5563 |
| scaffold1213 |
Augus-PASA |
exon |
61502 |
61903 |
. |
+ |
. |
ID=Dca5563.1.exon1;Parent=Dca5563.1 |
| scaffold1213 |
Augus-PASA |
exon |
62141 |
62287 |
. |
+ |
. |
ID=Dca5563.1.exon2;Parent=Dca5563.1 |
| scaffold1213 |
Augus-PASA |
exon |
62480 |
62689 |
. |
+ |
. |
ID=Dca5563.1.exon3;Parent=Dca5563.1 |
| scaffold1213 |
Augus-PASA |
exon |
62778 |
63113 |
. |
+ |
. |
ID=Dca5563.1.exon4;Parent=Dca5563.1 |
