Carnation DB

Dca55916.1

Annotation

9-exons
f-1
sp|D7TL42_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g01250#GO:0005634;GO:0003743;GO:0008270;GO:0045893;GO:0006352#2F2P1C
Os05t0305100-01 Similar to Transcription factor IIIB 90 kDa subunit (TFIIIB90) (hTFIIIB90) (B- related factor 1) (BRF-1) (hBRF) (TATA box-binding protein-associated factor, RNA polymerase III, subunit 2) (TAF3B2). Splice isoform 2.
Repeat List (scaffold785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55916.1	52	259	333	40.24	208	59	1e-69
Target_name	Start	End	Length	Cov(%)
sp\|D7TL42_VITVI	22	250	622	36.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55916.1	42	259	333	34.83	218	49	1e-59
Target_name	Start	End	Length	Cov(%)
Os05t0305100-01	12	250	575	41.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold785	Augustus	mRNA	75756	80026	.	-	.	ID=Dca55916.1;Parent=Dca55916
scaffold785	Augustus	exon	75756	75882	.	-	.	ID=Dca55916.1.exon1;Parent=Dca55916.1
scaffold785	Augustus	exon	75982	76109	.	-	.	ID=Dca55916.1.exon2;Parent=Dca55916.1
scaffold785	Augustus	exon	76497	76583	.	-	.	ID=Dca55916.1.exon3;Parent=Dca55916.1
scaffold785	Augustus	exon	77180	77259	.	-	.	ID=Dca55916.1.exon4;Parent=Dca55916.1
scaffold785	Augustus	exon	78609	78721	.	-	.	ID=Dca55916.1.exon5;Parent=Dca55916.1
scaffold785	Augustus	exon	79238	79314	.	-	.	ID=Dca55916.1.exon6;Parent=Dca55916.1
scaffold785	Augustus	exon	79410	79495	.	-	.	ID=Dca55916.1.exon7;Parent=Dca55916.1
scaffold785	Augustus	exon	79608	79677	.	-	.	ID=Dca55916.1.exon8;Parent=Dca55916.1
scaffold785	Augustus	exon	79793	80026	.	-	.	ID=Dca55916.1.exon9;Parent=Dca55916.1