Carnation DB

Dca56620.1

Annotation

6-exons
f-1
sp|F6HBY9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0018g01710#GO:0003676;GO:0000166#2F0P0C
AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:1212065-1213795 REVERSE LENGTH=245
Repeat List (scaffold801)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56620.1	15	227	228	76.75	213	73	3e-96
Target_name	Start	End	Length	Cov(%)
sp\|F6HBY9_VITVI	16	256	257	93.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56620.1	33	227	228	69.29	195	82	2e-91
Target_name	Start	End	Length	Cov(%)
AT3G04500.1	52	244	245	78.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold801	Augustus	mRNA	51291	56026	.	+	.	ID=Dca56620.1;Parent=Dca56620
scaffold801	Augustus	exon	51291	51464	.	+	.	ID=Dca56620.1.exon1;Parent=Dca56620.1
scaffold801	Augustus	exon	53523	53700	.	+	.	ID=Dca56620.1.exon2;Parent=Dca56620.1
scaffold801	Augustus	exon	54425	54522	.	+	.	ID=Dca56620.1.exon3;Parent=Dca56620.1
scaffold801	Augustus	exon	55304	55400	.	+	.	ID=Dca56620.1.exon4;Parent=Dca56620.1
scaffold801	Augustus	exon	55800	55885	.	+	.	ID=Dca56620.1.exon5;Parent=Dca56620.1
scaffold801	Augustus	exon	55973	56026	.	+	.	ID=Dca56620.1.exon6;Parent=Dca56620.1