Dca57206.1
Annotation
- 4-exons
- f-1
- sp|A5BYQ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_018886#GO:0005789;GO:0006506#0F1P1C
- AT5G46850.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PIG-X/PBN1 (InterPro:IPR013233). | chr5:19010714-19012010 FORWARD LENGTH=325
- Repeat List (scaffold82)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57206.1 |
26 |
299 |
299 |
39.13 |
274 |
42 |
2e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BYQ3_VITVI |
59 |
334 |
334 |
82.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57206.1 |
26 |
299 |
299 |
38.79 |
274 |
41 |
3e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G46850.2 |
53 |
325 |
325 |
84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold82 |
Augus-PASA |
mRNA |
76145 |
78186 |
. |
+ |
. |
ID=Dca57206.1;Parent=Dca57206 |
| scaffold82 |
Augus-PASA |
exon |
76145 |
76243 |
. |
+ |
. |
ID=Dca57206.1.exon1;Parent=Dca57206.1 |
| scaffold82 |
Augus-PASA |
exon |
76918 |
77257 |
. |
+ |
. |
ID=Dca57206.1.exon2;Parent=Dca57206.1 |
| scaffold82 |
Augus-PASA |
exon |
77344 |
77510 |
. |
+ |
. |
ID=Dca57206.1.exon3;Parent=Dca57206.1 |
| scaffold82 |
Augus-PASA |
exon |
77893 |
78186 |
. |
+ |
. |
ID=Dca57206.1.exon4;Parent=Dca57206.1 |
