Carnation DB

Dca57948.1

Annotation

15-exons
f-1
sp|B9RYN1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1311830#GO:0005634;GO:0003677;GO:0046983;GO:0009734;GO:0006355;GO:0006351#2F3P1C
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:12451592-12454737 FORWARD LENGTH=638
Repeat List (scaffold842)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57948.1	16	625	628	63.53	610	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RYN1_RICCO	20	694	694	97.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57948.1	16	606	628	58.75	591	60	0
Target_name	Start	End	Length	Cov(%)
AT4G23980.1	7	616	638	95.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold842	Augus-PASA	mRNA	91807	95141	.	-	.	ID=Dca57948.1;Parent=Dca57948
scaffold842	Augus-PASA	exon	91807	91954	.	-	.	ID=Dca57948.1.exon1;Parent=Dca57948.1
scaffold842	Augus-PASA	exon	92048	92235	.	-	.	ID=Dca57948.1.exon2;Parent=Dca57948.1
scaffold842	Augus-PASA	exon	92318	92680	.	-	.	ID=Dca57948.1.exon3;Parent=Dca57948.1
scaffold842	Augustus	exon	92800	92858	.	-	.	ID=Dca57948.1.exon4;Parent=Dca57948.1
scaffold842	Augustus	exon	92947	93091	.	-	.	ID=Dca57948.1.exon5;Parent=Dca57948.1
scaffold842	Augustus	exon	93174	93246	.	-	.	ID=Dca57948.1.exon6;Parent=Dca57948.1
scaffold842	Augustus	exon	93340	93453	.	-	.	ID=Dca57948.1.exon7;Parent=Dca57948.1
scaffold842	Augustus	exon	93552	93716	.	-	.	ID=Dca57948.1.exon8;Parent=Dca57948.1
scaffold842	Augustus	exon	93809	93899	.	-	.	ID=Dca57948.1.exon9;Parent=Dca57948.1
scaffold842	Augustus	exon	93981	94065	.	-	.	ID=Dca57948.1.exon10;Parent=Dca57948.1
scaffold842	Augustus	exon	94154	94306	.	-	.	ID=Dca57948.1.exon11;Parent=Dca57948.1
scaffold842	Augustus	exon	94442	94498	.	-	.	ID=Dca57948.1.exon12;Parent=Dca57948.1
scaffold842	Augustus	exon	94595	94690	.	-	.	ID=Dca57948.1.exon13;Parent=Dca57948.1
scaffold842	Augustus	exon	94888	95000	.	-	.	ID=Dca57948.1.exon14;Parent=Dca57948.1
scaffold842	Augustus	exon	95105	95141	.	-	.	ID=Dca57948.1.exon15;Parent=Dca57948.1