Dca58218.1
Annotation
- 2-exons
- f-1
- sp|Q9C6L3_ARATH#Putative uncharacterized protein F2J7.11#Arabidopsis thaliana (Mouse-ear cress)#Name=F2J7.11#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q9LVQ1_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold850)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58218.1 |
19 |
234 |
297 |
31.64 |
216 |
38 |
2e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9C6L3_ARATH |
683 |
929 |
1213 |
20.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58218.1 |
55 |
183 |
297 |
16.16 |
129 |
38 |
1e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
13 |
141 |
746 |
17.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold850 |
Augustus |
mRNA |
70122 |
71111 |
. |
+ |
. |
ID=Dca58218.1;Parent=Dca58218 |
| scaffold850 |
Augustus |
exon |
70122 |
70308 |
. |
+ |
. |
ID=Dca58218.1.exon1;Parent=Dca58218.1 |
| scaffold850 |
Augustus |
exon |
70405 |
71111 |
. |
+ |
. |
ID=Dca58218.1.exon2;Parent=Dca58218.1 |
