Carnation DB

Dca58535.1

Annotation

5-exons
f-1
sp|B9T738_RICCO#Amino acid transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0012320#GO:0016021#0F0P1C
Repeat List (scaffold86)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58535.1	4	458	462	76.19	455	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9T738_RICCO	3	456	461	98.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58535.1	1	462	462	73.59	462	74	0
Target_name	Start	End	Length	Cov(%)
AT3G30390.1	1	460	460	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold86	Augus-PASA	mRNA	331788	334639	.	+	.	ID=Dca58535.1;Parent=Dca58535
scaffold86	Augus-PASA	exon	331788	332217	.	+	.	ID=Dca58535.1.exon1;Parent=Dca58535.1
scaffold86	Augus-PASA	exon	333217	333369	.	+	.	ID=Dca58535.1.exon2;Parent=Dca58535.1
scaffold86	Augus-PASA	exon	333464	333667	.	+	.	ID=Dca58535.1.exon3;Parent=Dca58535.1
scaffold86	Augus-PASA	exon	333756	334221	.	+	.	ID=Dca58535.1.exon4;Parent=Dca58535.1
scaffold86	Augus-PASA	exon	334504	334639	.	+	.	ID=Dca58535.1.exon5;Parent=Dca58535.1