Carnation DB

Dca590.1

Annotation

7-exons
f-1
sp|B8AA62_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_03917#GO:0009982;GO:0003723;GO:0001522#2F1P0C
AT3G04820.1 | Symbols: | Pseudouridine synthase family protein | chr3:1321453-1325949 REVERSE LENGTH=715
Repeat List (scaffold1012)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca590.1	1	122	227	34.8	122	51	2e-31
Target_name	Start	End	Length	Cov(%)
sp\|B8AA62_ORYSI	283	438	650	24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca590.1	68	110	227	11.01	43	59	6e-09
Target_name	Start	End	Length	Cov(%)
AT3G04820.1	445	487	715	6.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1012	Augustus	mRNA	11157	13788	.	+	.	ID=Dca590.1;Parent=Dca590
scaffold1012	Augustus	exon	11157	11230	.	+	.	ID=Dca590.1.exon1;Parent=Dca590.1
scaffold1012	Augustus	exon	11316	11378	.	+	.	ID=Dca590.1.exon2;Parent=Dca590.1
scaffold1012	Augustus	exon	11462	11524	.	+	.	ID=Dca590.1.exon3;Parent=Dca590.1
scaffold1012	Augustus	exon	12010	12074	.	+	.	ID=Dca590.1.exon4;Parent=Dca590.1
scaffold1012	Augustus	exon	12202	12456	.	+	.	ID=Dca590.1.exon5;Parent=Dca590.1
scaffold1012	Augustus	exon	13367	13486	.	+	.	ID=Dca590.1.exon6;Parent=Dca590.1
scaffold1012	Augustus	exon	13745	13788	.	+	.	ID=Dca590.1.exon7;Parent=Dca590.1